GI

PhysiologyUpdated 15 min read
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Factors affecting GIT motility

Figure: Factors affecting GIT motility

Major organs and their functions

OrganMain function
Mouth and salivary glandsLubrication; begins carbohydrate digestion
EsophagusTransports food to the stomach
StomachStores and mixes food; acid and pepsin initiate protein digestion
Small intestinePrincipal site of digestion and nutrient absorption
Large intestineAbsorbs water and electrolytes; forms and stores feces
LiverProcesses absorbed nutrients; synthesizes bile, plasma proteins and other substances
GallbladderStores and concentrates bile
PancreasSupplies digestive enzymes and bicarbonate
Enteric nervous systemCoordinates local motility, secretion and blood flow

Gut Wall

The gut wall has four major layers, from the lumen outward.

LayerMain componentsMain functions
MucosaEpithelium, lamina propria, muscularis mucosaeAbsorption, secretion and local immune defense
SubmucosaConnective tissue, vessels, lymphatics, submucosal plexusSupport, blood supply and secretory regulation
Muscularis externaInner circular and outer longitudinal smooth muscleMixing, segmentation and propulsion
Serosa/adventitiaOuter covering or connective tissue attachmentProtection and structural support

Enteric nerve plexuses

PlexusLocationMain function
Myenteric (Auerbach)Between circular and longitudinal musclePrimarily controls motility, tone and peristalsis
Submucosal (Meissner)SubmucosaPrimarily controls secretion, absorption and local blood flow

MCQ tip: Auerbach = motility; Meissner = mucosal secretion and local regulation.

Smooth muscle physiology

  • GI smooth muscle exhibits electrical activity that influences contraction.
  • Slow waves are rhythmic fluctuations in membrane potential; they are not, by themselves, action potentials.
  • Spike potentials occur when the membrane reaches threshold and permit increased Ca²⁺ entry, triggering contraction.
  • Interstitial cells of Cajal act as pacemaker cells and help coordinate electrical activity.
  • Stretch, acetylcholine and excitatory enteric signals can increase contraction; inhibitory transmitters such as nitric oxide promote relaxation.

Enteric, Autonomic and Hormonal Regulation

Enteric Nervous System (ENS)

The ENS can coordinate many gastrointestinal activities independently of direct CNS commands, although it is modulated by sympathetic and parasympathetic input.

ENS neuron types

Neuron typeRole
Sensory/afferent neuronsDetect stretch, chemical composition and mucosal conditions
InterneuronsIntegrate local signals and coordinate reflex pathways
Motor neuronsControl smooth muscle, secretory cells, sphincters and local vessels

Short and long reflexes

  • Short reflexes: occur entirely within the ENS and can coordinate local secretion and motility.
  • Long reflexes: involve the CNS and autonomic pathways; they may be initiated by GI stimuli or signals from outside the gut.

Autonomic effects

FeatureParasympatheticSympathetic
Overall effect on digestionGenerally promotes digestionGenerally inhibits digestion
MotilityUsually increasesUsually decreases
SecretionUsually increasesUsually decreases
SphinctersOften promotes relaxation through enteric pathwaysOften promotes contraction
GI blood flowSupports digestive activity indirectlyVasoconstriction can reduce blood flow
Major pathwaysVagus and pelvic splanchnic nervesThoracolumbar sympathetic pathways

These are general patterns; the exact effect depends on the organ, receptor and enteric circuit.

Receptive Relaxation and Vagal Reflexes

When food enters the stomach, the proximal stomach relaxes to accommodate the meal without a large rise in intragastric pressure.

Mechanism

  1. Swallowing and esophageal distension activate sensory afferents.
  2. Signals travel through vagal pathways to the brainstem.
  3. Vagal efferent signals return to the stomach.
  4. Enteric inhibitory neurons release mediators, particularly nitric oxide and VIP.
  5. Fundic smooth muscle relaxes, allowing the stomach to accommodate food.

Clinical importance: Impaired accommodation may contribute to early satiety and postprandial discomfort.

Remember: Receptive relaxation is a vagovagal reflex, coordinated through the vagus nerve and enteric inhibitory neurons.

GI Hormones, Paracrines and Neurocrines

GI signaling substances may act through the bloodstream, diffuse locally or function as neurotransmitters.

Regulatory substance categories

CategoryMode of actionExamples
Endocrine hormonesReleased into blood and act at distant sitesGastrin, CCK, secretin
ParacrinesAct locally on nearby cellsSomatostatin, histamine
NeurocrinesReleased from neuronsAcetylcholine, VIP, GRP

Major GI hormones

HormoneMain sourceMajor stimulusMain actions
GastrinG cells of gastric antrumPeptides, amino acids, gastric distension and vagal GRPIncreases gastric acid secretion; supports mucosal growth
CCKI cells of duodenum and jejunumFatty acids and amino acidsStimulates pancreatic enzyme secretion, gallbladder contraction and satiety; slows gastric emptying
SecretinS cells of duodenumAcidic chymeStimulates pancreatic and biliary bicarbonate secretion; reduces gastric acid activity
GIPK cells of proximal small intestineOral glucose, fats and nutrientsIncretin effect: increases glucose-dependent insulin secretion
GLP-1L cells, predominantly distal small intestine and colonNutrients, especially oral glucoseIncreases glucose-dependent insulin secretion, suppresses glucagon, slows gastric emptying and promotes satiety
MotilinSmall intestineFasting/interdigestive stateHelps initiate migrating motor complexes
SomatostatinD cells of stomach, intestine and pancreasAcid and other local signalsBroadly inhibits endocrine and exocrine secretion
HistamineGastric enterochromaffin-like (ECL) cellsGastrin and vagal signalingStimulates parietal-cell H₂ receptors to increase acid secretion
VIPEnteric neuronsNeural stimulationSmooth muscle relaxation, intestinal secretion and vasodilation
GhrelinMainly stomachFastingPromotes hunger and supports GH secretion

Hormones (in detail)

CCK

FeatureKey MCQ Fact / Concept
Site of SecretionI-cells of the duodenum and jejunum
Primary Stimuli for ReleaseFatty acids (long-chain) and amino acids / small peptides
Receptors• {CCK}_1 (CCK-A): Peripheral (gallbladder, pancreas, vagal afferents)

• {CCK}_2 \ CCK-B): Brain/CNS and stomach
Intracellular SignalingG-protein coupled ({G}_q -
Gallbladder ActionContracts gallbladder smooth muscle (stimulates bile release)
Sphincter of Oddi ActionRelaxes sphincter of Oddi
Pancreatic ActionStimulates secretion of enzyme-rich pancreatic juice (lipase, amylase, proteases)
Gastric ActionSlows / Delays gastric emptying (relaxes stomach, contracts pyloric sphincter)
Intestinal MotilityIncreases small bowel motility (segmentation and peristalsis)
CNS / Behavioral ActionStimulates satiety via vagal afferents (decreases short-term food intake)
Trophic ActionPromotes tissue growth (hypertrophy/hyperplasia) of the exocrine pancreas

Gastrin

FeatureKey MCQ Fact / Concept
Site of SecretionG-cells of the stomach antrum (and duodenum)
Primary Stimuli for Release• Peptides & amino acids (esp. Phenylalanine & Tryptophan)

• Stomach distension (vagal reflexes)

• Vagal stimulation via GRP (Gastrin-Releasing Peptide / Bombesin)

• High gastric pH (luminal alkalinization)
Primary Inhibitors• Low gastric pH (< 1.5 - 2.0) (direct negative feedback by {H}+

• Somatostatin (from D-cells)

• Secretin
Receptor Type{CCK}_2 / {CCK-B} Receptor
Intracellular SignalingG-protein coupled
Gastric Acid ActionStimulates {H}^+secretion directly via Parietal cells and indirectly (major pathway) by stimulating ECL cells to release Histamine
Trophic ActionPromotes growth (hypertrophy/hyperplasia) of the gastric mucosa (ECL and parietal cells)
Gastric MotilityIncreases gastric tone, contracts the pyloric sphincter - delays/slows gastric emptying
LES ActionIncreases Lower Esophageal Sphincter (LES) tone (prevents reflux)

VIP - Vasocative Intestinal Peptide

FeatureKey MCQ Fact / Concept
SourceSecreted by enteric neurons (neurotransmitter, NOT an endocrine hormone released into blood by mucosal cells)
Primary StimulusDistension of the gut lumen and vagal/parasympathetic nerve stimulation
GI Smooth Muscle EffectRelaxes GI smooth muscle & sphincters (e.g., Lower Esophageal Sphincter, Sphincter of Oddi, Internal Anal Sphincter)
Gastric Acid ActionInhibits gastric acid secretion {H}^+secretion)
Pancreatic & Intestinal SecretionIncreases secretion of water and electrolytes (bicarbonate,{HCO}_3^) from the exocrine pancreas and intestinal epithelium
VasodilationCauses potent peripheral vasodilation (increases intestinal blood flow)

Secretin

FeatureKey MCQ Fact / Concept
Site of SecretionS-cells of the duodenum (and upper jejunum)
Primary StimulusLow pH in the duodenum (H}^+ / gastric acid, pH < 4.5) and fatty acids
Primary InhibitorAlkaline pH in the duodenum (negative feedback once acid is neutralized)
Pancreatic Effect (Main Action)Stimulates pancreatic ductal cells to secrete an aqueous, bicarbonate-rich {HCO}_3^) fluid
Biliary EffectStimulates biliary secretion of water and {HCO}_3 into bile
Gastric ActionInhibits gastric acid secretion (inhibits parietal cells/gastrin) and delays gastric emptying
Intestinal MotilityDecreases intestinal motility (allows time for neutralization)
Intracellular SignalingG-protein coupled (G}_s

High-yield hormone distinctions

  • Gastrin: promotes gastric acid secretion.
  • CCK: pancreatic enzymes and gallbladder contraction.
  • Secretin: bicarbonate secretion in response to acid.
  • GIP and GLP-1: incretin hormones that enhance glucose-dependent insulin secretion.
  • Somatostatin: broad inhibitory regulator.
  • Motilin: fasting migrating motor complex.

Incretin effect

Oral glucose produces a greater insulin response than an equivalent intravenous glucose load because gut hormones amplify insulin secretion.

MCQ tip: GIP and GLP-1 are responsible for much of the incretin effect.

Oral Phase, Saliva, Swallowing and Esophagus

Salivary Secretion

Saliva lubricates food, supports swallowing, protects oral tissues, buffers acids and begins digestion.

Two-stage model of saliva formation

  1. Acinar cells produce an initial fluid containing water and electrolytes, broadly similar to plasma in osmotic concentration.
  2. Duct cells modify this fluid by reabsorbing Na⁺ and Cl⁻ and secreting K⁺ and HCO₃⁻.

Because the ducts are relatively impermeable to water, final saliva is usually hypotonic to plasma.

Effect of flow rate

FeatureLow flow rateHigh flow rate
Time for ductal modificationLongerShorter
Na⁺ and Cl⁻Generally lowerGenerally higher
HCO₃⁻Generally lowerGenerally higher
Saliva osmolalityMore hypotonicMoves closer to plasma osmolality
Clinical associationResting secretionStimulated secretion

Composition and functions

ComponentFunction
WaterLubrication and dissolution of food
Bicarbonate and phosphateBuffering
Salivary amylaseBegins starch digestion
Lingual lipaseInitiates lipid digestion; activity may continue in the stomach
MucinsLubrication and mucosal protection
IgAMucosal immune defense
Lysozyme and lactoferrinAntimicrobial protection

Autonomic regulation

  • Parasympathetic stimulation, mainly through CN VII and CN IX pathways, produces abundant watery saliva.
  • Sympathetic stimulation can promote secretion of protein-rich saliva and may contribute to a dry-mouth sensation.
  • Salivary secretion is influenced by taste, chewing, smell and conditioned responses.

Clinical relevance

Xerostomia can result from medications, dehydration, salivary gland disorders or radiation injury. Reduced saliva increases the risk of dental caries, oral discomfort, swallowing difficulty and mucosal infection.

Swallowing

Swallowing transfers food from the mouth to the stomach while protecting the airway.

Three phases

PhaseControlMajor events
OralVoluntaryTongue propels the bolus into the pharynx
PharyngealInvoluntary reflexSoft palate closes the nasopharynx; airway is protected; upper esophageal sphincter relaxes
EsophagealInvoluntaryPeristalsis transports the bolus toward the stomach

Esophageal motility

  • Primary peristalsis: follows a swallow.
  • Secondary peristalsis: triggered by esophageal distension when material remains in the esophagus.
  • The lower esophageal sphincter relaxes ahead of the bolus to permit entry into the stomach.

Sphincter control

The upper esophageal sphincter is normally contracted between swallows, helping prevent air entry and regurgitation into the pharynx.

The lower esophageal sphincter and crural diaphragm help prevent gastric contents from refluxing into the esophagus.

MCQ tip: Achalasia is associated with impaired LES relaxation and loss of normal esophageal peristalsis.

Stomach Physiology

Functional Regions of the Stomach

RegionMain role
Fundus and proximal bodyStorage and receptive relaxation
Distal body and antrumMixing, grinding and retropulsion
PylorusRegulates delivery of chyme into the duodenum

Gastric Gland Cells

CellSecretionMain function
Parietal cellsHCl and intrinsic factorAcidification and vitamin B₁₂ absorption
Chief cellsPepsinogen and gastric lipaseProtein and some lipid digestion
G cellsGastrinStimulates acid secretion
D cellsSomatostatinInhibits gastrin and acid secretion
ECL cellsHistamineStimulates parietal-cell H₂ receptors
Mucous cellsMucus and bicarbonateProtect gastric mucosa

Parietal-cell acid secretion

Inside parietal cells, carbonic anhydrase facilitates the formation of H⁺ and HCO₃⁻ from CO₂ and water.

  • H⁺ is secreted into the gastric lumen by the H⁺/K⁺-ATPase.
  • Cl⁻ enters the lumen through chloride channels.
  • H⁺ and Cl⁻ form gastric hydrochloric acid.
  • HCO₃⁻ enters the blood, producing the postprandial alkaline tide.

Remember: The proton pump is the final common pathway for gastric acid secretion.

Regulation of acid secretion

Three major stimulators act synergistically on parietal cells.

StimulatorSourceReceptor/pathwayEffect
AcetylcholineVagal/enteric neuronsM3; increases intracellular Ca²⁺Increases acid secretion
GastrinG cellsCCK-B; increases intracellular Ca²⁺Stimulates acid secretion and ECL-cell histamine release
HistamineECL cellsH₂; increases cAMPStrongly stimulates acid secretion

Inhibitors of acid secretion

  • Somatostatin inhibits gastrin release and parietal-cell activity.
  • Prostaglandins reduce acid secretion and support mucus/bicarbonate-mediated mucosal protection.
  • Secretin and other intestinal signals help inhibit gastric acid activity when acidic chyme enters the duodenum.

Drugs and their targets

Drug classTargetMain effect
Proton-pump inhibitors (PPIs)H⁺/K⁺-ATPaseStrongly suppress acid secretion
H₂ receptor blockersHistamine H₂ receptorsReduce histamine-mediated acid secretion
AntimuscarinicsMuscarinic receptorsReduce cholinergic stimulation; limited routine role
Somatostatin analoguesSomatostatin receptorsInhibit several GI secretory processes

Phases of Gastric Secretion

PhaseTriggerKey mechanism
CephalicSight, smell, taste and anticipation of foodVagal stimulation
GastricFood in stomach, distension, peptidesLocal and vagovagal reflexes; gastrin release
IntestinalChyme entering small intestineBrief stimulatory signals followed mainly by inhibition of gastric activity and emptying

Clinical correlation: peptic ulcer disease

Ulcers occur when damaging factors overwhelm mucosal defenses. Important contributors include Helicobacter pylori, NSAIDs and gastric acid-pepsin activity.

  • NSAIDs reduce protective prostaglandin synthesis.
  • H. pylori disrupts mucosal defenses and alters gastrin/somatostatin regulation.
  • PPIs reduce acid secretion and support ulcer healing.

Gastric Motility and Emptying

The stomach stores food, mixes it with secretions, reduces particle size and delivers chyme gradually into the duodenum.

Main movements

  • Receptive relaxation: allows the proximal stomach to accommodate a meal.
  • Mixing waves: propagate toward the antrum.
  • Retropulsion: forceful antral contractions drive material backward through the partially closed pylorus, improving grinding.
  • Gastric emptying: regulated delivery of chyme into the duodenum.

Factors influencing gastric emptying

FactorEffect
Gastric distensionGenerally promotes emptying
Duodenal fatSlows emptying, partly through CCK
Duodenal acidSlows emptying, partly through secretin and neural reflexes
Duodenal hyperosmolarityTends to slow emptying
Enterogastric reflexesInhibit gastric motility and emptying
GLP-1 and related signalsSlow gastric emptying

Exam tip: Fat entering the duodenum is a strong signal to slow gastric emptying, allowing time for digestion and absorption.

Pancreatic Secretion and Small-Intestinal Digestion

Pancreatic Secretion

The exocrine pancreas produces digestive enzymes and bicarbonate-rich fluid.

Acinar versus duct cells

Cell typeMain secretionMajor regulator
Acinar cellsDigestive enzymes and enzyme precursorsCCK and vagal acetylcholine
Duct cellsBicarbonate-rich fluidSecretin

Pancreatic enzymes

Enzyme/precursorSubstrate or role
Pancreatic amylaseStarch
Pancreatic lipaseTriglycerides
TrypsinogenInactive precursor of trypsin
ChymotrypsinogenInactive precursor of chymotrypsin
ProcarboxypeptidasesPrecursors of carboxypeptidases
NucleasesNucleic acids

Most pancreatic proteases are secreted as inactive zymogens to prevent autodigestion.

Activation of pancreatic proteases

  1. Brush-border enteropeptidase converts trypsinogen to trypsin.
  2. Trypsin activates additional trypsinogen.
  3. Trypsin activates other pancreatic zymogens.
  4. Activated enzymes digest dietary proteins in the intestinal lumen.

Clinical correlation: Premature enzyme activation or impaired pancreatic duct drainage can contribute to pancreatitis.

Regulation

  • CCK stimulates acinar enzyme secretion.
  • Secretin stimulates bicarbonate-rich ductal secretion in response to acidic duodenal contents.
  • Vagal acetylcholine supports pancreatic secretion during feeding.

Bile Secretion and Gallbladder Function

Bile supports fat digestion and absorption. It contains bile salts, phospholipids, cholesterol, bilirubin, electrolytes and water.

Bile salts

Bile salts are amphipathic: they have both hydrophilic and hydrophobic regions.

Their main functions are:

  • Emulsification of dietary fats.
  • Formation of mixed micelles.
  • Delivery of lipids and fat-soluble vitamins to the intestinal surface.
  • Facilitation of absorption of vitamins A, D, E and K.

Enterohepatic circulation

  1. The liver synthesizes bile acids from cholesterol.
  2. The gallbladder stores and concentrates bile between meals.
  3. CCK stimulates gallbladder contraction and promotes delivery of bile into the duodenum.
  4. Most bile salts are reabsorbed in the terminal ileum.
  5. Portal blood returns them to the liver, where they are taken up and secreted again.

Remember: The terminal ileum is the major site of bile salt reabsorption.

Bile salt loss

Terminal ileal disease or resection can reduce bile salt recycling.

  • Reduced bile salt availability may impair fat absorption and cause steatorrhea.
  • Excess bile acids reaching the colon may stimulate secretion and contribute to diarrhea.

Small-Intestinal Digestion and Absorption

The small intestine is the principal site of nutrient digestion and absorption. Its folds, villi and microvilli greatly increase absorptive surface area.

Carbohydrate digestion

StepEnzyme/processResult
Oral phaseSalivary amylaseBegins starch digestion
Intestinal lumenPancreatic amylaseProduces smaller carbohydrates and oligosaccharides
Brush borderDisaccharidasesProduces absorbable monosaccharides
Apical uptakeSpecific transportersTransfers sugars into enterocytes
Basolateral exitGLUT transportersTransfers sugars toward portal blood

Monosaccharide absorption

SugarApical transporterMain mechanism
GlucoseSGLT1Na⁺-dependent secondary active cotransport
GalactoseSGLT1Na⁺-dependent secondary active cotransport
FructoseGLUT5Facilitated diffusion
Glucose and galactose exitGLUT2Facilitated diffusion across basolateral membrane
Fructose exitGLUT2Facilitated diffusion across basolateral membrane

The Na⁺ gradient supporting SGLT1 is maintained by basolateral Na⁺/K⁺-ATPase.

Clinical correlation: Oral rehydration solution works because intestinal Na⁺-glucose cotransport remains functional in many diarrheal illnesses, allowing Na⁺ and water absorption.

Protein digestion and absorption

  • Gastric pepsin begins protein digestion.
  • Pancreatic proteases break proteins into smaller peptides and amino acids.
  • Brush-border and intracellular peptidases complete digestion.
  • Amino acids use specific transporters, many coupled to Na⁺.
  • Di- and tripeptides enter through PEPT1, which uses an H⁺ gradient, and are generally broken down further inside enterocytes.

Most absorbed amino acids enter portal blood.

Lipid digestion and absorption

  1. Bile salts help emulsify fat.
  2. Pancreatic lipase, aided by colipase, digests triglycerides into monoglycerides and fatty acids.
  3. These products enter mixed micelles with bile salts.
  4. Micelles deliver lipids to the brush border.
  5. Lipids enter enterocytes and are re-esterified into triglycerides.
  6. Triglycerides are packaged with cholesterol, phospholipids and apoproteins into chylomicrons.
  7. Chylomicrons enter intestinal lymphatics and subsequently reach systemic blood.

Short- and medium-chain fatty acids

Short- and medium-chain fatty acids are more water-soluble than long-chain fatty acids and can enter portal blood directly to a greater extent, often bound to albumin. They do not depend on chylomicron formation to the same degree.

Fat-soluble vitamins

Vitamins A, D, E and K depend on normal fat digestion and absorption. Bile salt deficiency or pancreatic insufficiency can therefore produce fat-soluble vitamin deficiencies.

Vomiting — Neural Pathway and Metabolic Consequences

Vomiting is coordinated by brainstem neural networks that integrate signals from the GI tract, vestibular system, higher centers and chemoreceptor trigger pathways.

Major inputs

  • GI irritation and distension activate vagal and visceral afferents.
  • Motion-related signals reach the brainstem through vestibular pathways.
  • Drugs and toxins can activate the chemoreceptor trigger zone.
  • Higher brain centers can contribute to nausea and vomiting.

Metabolic effects

Vomiting causes loss of gastric HCl and fluid.

ConsequenceMechanism
Metabolic alkalosisLoss of gastric H⁺
HypochloremiaLoss of chloride-rich gastric fluid
HypokalemiaRenal potassium losses and associated volume/aldosterone effects
Volume depletionLoss of water and electrolytes
Paradoxical aciduria in severe casesVolume depletion and hypokalemia promote renal H⁺ secretion despite systemic alkalosis

Exam tip: Persistent vomiting classically causes hypochloremic metabolic alkalosis.